crispr-analysis-utils

Python utilities and command-line tools for analysing CRISPR perturbation screens, imported as import crispr_analysis_utils as cau.

• Getting started: install, then a first example.
• Guide alignment: find every guide's genomic site.
• Gene annotation: place those sites in genes.
• Element mapping: map guides to the elements a screen targets.
• IGVF export: write the design in the IGVF per-guide format.
• Agents and skills: use the package from Claude Code.
• API reference: every public function, from its docstring.
• Contributing: set up, conventions, and adding a module.